hernandezvargash

Thank you, That feature could be useful when visualizing small but consistent differences. Hope someone submits a pull request. Best, Hector

Thank you @s-aibar for the fast response. I'll go back to the previous versions and try again. The reason I updated was because of this error, but I may have...

Hello, My code is working now after downgrading like this: SCENIC : 1.1.2 RcisTarget : 1.16.0 AUCell : 1.18.1 I forgot to mention in my previous post that I also...

I managed to pass the **initializeScenic** step, but now I get the same error at the **runGenie3** step: ``` runGenie3(exprMat_filtered, scenicOptions) Error in data(list = motifAnnotName, package = "RcisTarget", verbose...

this issue seems to be related with issue #334 runGenie3 seems to be working for me after following @joyduck indicationes here: https://github.com/aertslab/SCENIC/issues/334#issuecomment-1300654055 except this time I'm using the most recent...

Hi, same issue here. I just installed gpt-researcher in a conda environment and using a GOOGLE_API_KEY and TAVILY_API_KEY. Only thing I did was changing the embeddings in the config file,...

thanks for the fast response, yes, I'm using human gene symbols, they are not recognized when I save my object as an .rds or with SaveH5Seurat + Convert to .h5ad....