guillemsanchezsanchez1996

@tom-snir @qiangfan2022 Check version of jdk in your computer. Needs to be 1.8 if your computer has updated jdk to 1.18 uninstall and go to java archives here: https://www.oracle.com/java/technologies/downloads/archive/ Download...

Dear Phil, Thanks a lot for your fast answer! I have only TCR sequence [AB1A.txt](https://github.com/phbradley/tcr-dist/files/8017484/AB1A.txt) This is an example of a Mixcr processed file, as you can see same clones...

Hello again Phil, Do you think is it feasable to try to transform these vdjtools/mixcr files? Or you think this single chain data cannot be used in your package to...

Dear Phil, Thanks for the suggestions I have 12 samples with around 100 to 500 TCR sequences. Do you think is it feasable? Is there a way to adapt the...

Dear Andrew and Phil, Thank you both for your suggestions. I was awared of tcrdist3 and I managed to run several functions with my data. I was interested in tcr-dist...

Hello everybody, First of all thanks a lot Conga team for creating this nice and cool package, and for keeping in mind the gd TCR "aficionados" in your work. I...

Thanks a lot Sebastiaan for your fast answer! Looking forward for your help to solve this issue :) Guillem

Ups sorry I have closed the issue by mistake!

> Hi Guillem, > > Thanks for using ClusTCR. We are very sorry about this inconvenience. I believe your assumption is correct, the `parse_airr` function provides an `numpy.array` as output,...

Sadly I do not have acces to the BAM data (fastq are downloaded from GEO)... I have experienced also some background noise specially from nonFACS sorted data. But in other...