Francesco Patane, MSc

icon indicating an email [email protected]

icon company Immunobiology Laboratory - ULB icon location Bruxelles, Belgium icon location Biotechnologist. Keen on scientific programming and machine learning applied to drug discovery. PhD student at the University of Bruxelles

Results 5 issues of Francesco Patane, MSc

How to integrate-remove batch effects and assign cells

2 comment

Hi! From my kwnoledge, integrateLayers works on a low dim representation, so it does not modify counts or data. If I want to integrate and assign cells (many tools operate...

Scoring/ranking problem in basicmhc1 and tepitope

Hi! I’m using tepitope and basicmhc1 models and i noticed the cutoff method in tepitope work well but not in basicmhc1. In particular, with basicmhc1 epitopes with rank 1 are...

dependency issues adjusted | README | install PyQt5 and libxcb-xinerama0

[Bug]: "flip" argument of the visual_channel_y does not work

### Guidelines - [X] I agree to follow this project's Contributing Guidelines. ### Project Version all ### Platform and OS Version Ubuntu 22.04 ### Existing Issues no ### What happened?...

bug

Suggestions for Utilizing hdWGCNA to Study Regulatory Network Changes between conditions

3 comment

Hi again, smorabit, I hope this message finds you well. I'm reaching out to seek your advice on using hdWGCNA for studying regulatory network changes in tumor-associated macrophages compared to...

question