Dr. Ellen L Bouchard

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icon company Oregon Health & Science University icon location United States icon location Computational Biologist in the laboratory of Dr. Bahareh Ajami at OHSU. Experienced in single-cell multi-omics, neuroinflammation, and neurodegeneration.

Results 3 issues of Dr. Ellen L Bouchard

Issue with loading old liger object via convertOldLiger function

3 comment

Dear Welch lab/liger team, I'm hoping for some help with figuring out how to load in an old liger object that is giving me issues. The object is from a...

Error while using LoadH5Seurat : "Error in sparseMatrix(i = x[["indices"]][] + 1, p = x[["indptr"]][], x = x[["data"]][], : 'p' must be a nondecreasing vector"

2 comment

Hello, I am trying to use the SeuratDisk tools to read in a .h5ad file and convert it into a Seurat object. When I use 'Convert' to generate a .h5seurat...

Fix annotation bug in plotly_build.R

Fixed a bug in which, if the plot only has one annotation but the 'font' attribute has multiple elements (such as color and size), the annotation becomes duplicated. This was...