danielsf

I'm open to the idea that this is not the right place to document this. Should it go in the `BehaviorSession.to_nwb()` docstring?

Release updated VBO dataset

2

**Tasks** - [ ] Generate new metadata and NWB files for VBO released-sessions using something like `VisualBehaviorOphysProjectCache.from_lims(data_release_date=['2021-03-25', '2021-08-12'])` - [ ] Perform whatever validation Marina and company wanted done on...

Design validation check for LIMS upload of spike-sorted ecephys data

5

During the 2022 VBN data-release push, several ecephys sessions were discovered that uploaded to LIMS in an incomplete state. The units stored in the LIMS ecephys_units table did not map...

Determine how to create an SWDB-like environment from a Dockerfile

1

Kael Dai is going to give us a Dockerfile defining the cloud computing environment they want us to provide for students at the BMTK 2022 workshop. We first need to...

Write/connect VBN documentation notebooks

4

**Tasks** - [x] Write basic data access notebook for VBN (basically copied from the one we wrote for VBO) - [x] Get example data analysis notebooks from scientists - [x]...

Unblock learning-mFISH pipeline

1

The learning-mFISH group needs (at least) Suite2P segmentation to be running on their data in LIMS in order to do their prototype investigation. This epic exists to encapsulate all of...

Talk to VBO team about updated data release

1

We made a lot of changes to the NWB-generation code in summer 2021, assuming there would be a new version of the VBO data release. The changes happened; the release...

Epic to track issues related to a potential update of the VBO 2021 data release

We know we need to add "behavior tracking" fields to the ecephys NWB files as a part of v2 VBN data release. We do not know what those fields are....

As part of version 2 of the VBN data release, we are going to need to create NWB files for the LFP ("local field potential") data. There is, nominally, already...