Colleen Xu

This seems to be related to the problems I brought up: - as a user of the biolink model for the metaKG, I'm mapping data/knowledge to biolink predicates and non-biolink...

likely related to #669. I don't think this has been addressed yet. I think it could be closed if a formal decision was made to not work on this...

I don't think it's the same as #478 since these aren't full reactions being modeled. I imagine a complete reaction as having "products" and these don't. It is more of...

Edit: note that DRUGBANK:target has a specific definition, that is not addressed with its current mapping to "physically interacts with". [From the glossary](https://dev.drugbank.com/guides/terms/target): the drug-target binding changes the normal function...

Maybe related to https://docs.google.com/spreadsheets/d/1VI2s5YVDwOHiQv7hBWkl12d86yWvm-z_pDJFnDwsoiY/edit#gid=1053404343

@ehinderer I believe you're talking about the "target" post above (and not the "enzyme" example in the first post)? Yes, I do mean something along those lines. "physically interacts with"...

I don't see a particular issue with having multiple targets. I wonder if other resources take an approach similar to drugbank, where a chemical can have multiple "target" gene/proteins, because...

@andrewsu @NikkiBytes A few questions after looking over the [XML example](https://github.com/NikkiBytes/BioThings_dojo/blob/main/data_plugins/hmdb_proteins/proteins.xml) vs the [website](https://hmdb.ca/proteins/HMDBP00001): * I think the type of protein (it's under ) could be included. Perhaps it would...

@NikkiBytes please follow up with @zcqian . I am not involved in the process of actually uploading / creating APIs...

It looks like there's already some gene group info in MyGene.info that is shown as node attribute in BTE. BTE brings in interpro info [using this code](https://github.com/biothings/biomedical_id_resolver.js/blob/89dc0137bcd104fd28b0ccb4255a62490bb49764/src/config.ts#L31). You can see...