caonetto

Results 6 comments of caonetto

augustus: ERROR PP::Profile: Error parsing pattern file

Hello, I tried installing augustus separately, removed the conda version and updated the config path, however I am still getting the PP::Profile error. I am running Ubuntu 22. Is funannotate...

Add the modified pseudo F statistic from Anderson et al 2017 to account for heterogeneity in adonis/adonis2

Same here.

Fully supported CRISPR edit not detected.

Hi @fritzsedlazeck Just adding to these topic, just discovered another CRISPR homozygous deletion which is not even called at all, does not appear with the --no-qc flag and has very...

Fully supported CRISPR edit not detected.

Strangely, as soon as I remove the --minsupport 10 flag this variant is detected even though there are clearly more than 10 bp supporing it. ?

question on split pairs

Thank you for your quick response. Do you have a recommendation on how to split chimeric reads with midstrand adapters from dorado basecalled reads? Thanks!

html output option not available in v 0.3.3?

Thank you for your quick response!