Camilla Ceccarani

Subset genes in the initial steps

5

Is there a way to subset genes and remove some of them (namely) from the maf file? Or, the opposite, only keep the ones we want to investigate more and...

ASV reduction/pruning in phyloseq object

1

Hi all, I had more than65k ASV sequences in my dataset and cut them down to the first 10k in the dada2 pipeline before creating the tree `alignment = AlignSeqs(ASVs.nochim[1:1000],...

Hi @ricardo-bion, I have a problem with rescaling... can you help me? I'm not so good in R, so maybe there's something I'm missing :) ``` genus % select(1:5) %>%...

Installation issues with Rfast

2

Hi all, I'm having BIG issues trying to install ggpicrust2. I've addressed many of those (mainly related to the R and RStudio needed upgrade) but I'm clueless about the installation...