Blake Sweeney
Blake Sweeney
While Rfam uses the U3, U14 _snoRNA terms, I'd be fine with removing then for similar reasons as #546. We can switch to the correct snoRNA terms instead. I'd also...
Hi, that sounds like a reasonable change for us to make. If there is no rush for it I will schedule it for our next release in 3 months. If...
I think for the next release we should see if we can get them to: - [x] Get the website running again - [ ] See if they are willing...
I've looked at this again and it seems we can download all their data, but we cannot link to them cleanly. I think we should fetch and import their data...
Just ran into this issue so I'm adding some comments about the searches I tried. If I do sequences in gorrilla I don't see any that are also in human...
The second issue has been fixed somehow. Both deployed and test lack the incorrect facets. So something in our recent indexing fixed it.
There are at least 23 xrefs/accessions with this issue. We can find them by doing: ```sql select * from xref, rnc_accessions acc where xref.ac = acc.accession and acc.database = 'MODOMICS'...
@mt1022 Thanks for point this out. We will only have BED files this release as part of our new genome mapping pipeline. We will add GFF files afterwards, and in...
There were also suggestions about computing coding potential for sequences.
I was just looking into this a little and it seems that the difference is due to the fact that the json download is not species specific (it uses ids...