Pengzhi Zhang

How to get isoform counts for single cell RNA-seq data?

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Great tool that integrates lots of functions! I was wondering if there is a way to get the isoform counts. I was trying to get the isoform counts following your...

run_ora using adata as the input

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**Describe the bug** Using adata as input, if there is an empty sample (i.e., expression of the cell/sample is 0 for all genes), there will be an error writing the...

Dear develepper(s) and fellow diffusioners, Could you please give some insights on how to load the CoCa pre-trained model (using open-clip implementation) in dalle2-pytorch? Thank you so much! P.

I found the code useful. I rewrote the function using 2D numpy array as input in my use case. I'm posting it here if it's of any help to others...

Hello cell2sentence developers, Thank you for sharing your work! I wonder how each gene is tokenized in the model. To the best of my knowledge, GPT likely tokenizes many gene...

Hello, Thank you so much for the amazing work! I enjoyed reading your paper. I have a quick question regarding your pretrained weights. I think one of the advantages of...

Hello Emil, I'd love to compare two overlayed maps and have control of them by using a slider. Here's an example on two overlayed images with dash: https://community.plotly.com/t/image-slider-in-dash/51130/10 And another...