Bin Lu

assembly size increased slightly after long-reads polishment

1

Hi, The assembly size increased from 1839M to 1866M after long-reads correction using wtpoa-cns. Is it reasonable? Thanks Bin

polishing strategy choice

3

Hi ruanjue, After obtaining consensus, which following polishing strategy is better? 1. One round wtpos-cns using long reads, then three round wtpos-cons using short reads 2. One round wtpos-cns +...

polishing strategy and rounds

3

Hi, I have an assembly generated using wtdbg2 which could use wtpos-cns performing polishment. Will I get a better result through performing additional long- or short-reads polishing steps using the...

How to install ggmsa under R 3.6

3

Hi, Thanks for the nice tool. But I notice that it depends on the newest R 4.1. Is there a way to install ggmsa under old R version (R 3.6)?...

Segmentation fault (core dumped)

13

I used spaln to annotated a gene structure in de-nove assembly using a homologous protein, but spaln report error (Segmentation fault (core dumped)). The command as follow spaln -Q3 -O0...