maxquant_linux_guide

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System.Exception: Exception during execution of external process: 229605

2

My Maxquant analysis runs well then it fails at the Writing tables stage. What could be causing this problem? My fasta file was constructed by myself. Errors are as below,...

littlenapleon

Unhandled Exception: System.Exception: Exception during execution of external process: 71235

3

Hi, @atc3, I am a student at the University of Chinese Academy of Science. I encountered a problem when I run Maxquant on the Linux system, the error was listed...

ningxiaolian

Error: Exception during execution of external process

1

Hello MaxQuant Team, I am trying to run a batch of experiment on cluster with 15 raw files and 6 fasta files as database. I am getting an error: Exception...

devenderarora

ExternalProcess False_Cannot find the variable modification: Phospho (K)_ at MsLib.Data.ModPep.ModPepUtil.ReadParametersModPepSet

3

I want to add Phospho (K) in \ block, and this succeed on windows platform, but failed on linux platform and get the error messages "ExternalProcess False_Cannot find the variable...

yang001-find

System.IO.FileNotFoundException: Could not find file

3

Hi, _I've been using your Github to help me run MaxQuant for the first time on my Mac its been helpful but I've run into the following problem that the...

mo-khaife-bot

System.IO.FileNotFoundException: Centos7, netstandard

4

I tried many ways to solve the problem but didn't. It's the problem of Maxquant or mono? `mono MaxQuant/bin/MaxQuantCmd.exe mqpar.xml` 

TrekHsu

[ERROR] FATAL UNHANDLED EXCEPTION: System.Exception: Exception during execution of external process: 217362

3

My Maxquant analysis runs smoothly then it fails at the FDR assignment stage. What could be causing this problem? Loading requirement: compilers/gcc820 python/anaconda-python-3.7 Configuring Testing fasta files Testing raw files...

okendojo

Another UNHANDLED EXCEPTION

7

I tried to run the following script, but getting errors too. $mono MaxQuant/bin/MaxQuantCmd.exe data/mqpar.xml Configuring Unhandled Exception: System.Exception: Exception during execution of external process: 5406 at BaseLibS.Util.WorkDispatcher.ProcessSingleRunExternalProcess (System.Int32 taskIndex, System.Int32...

doggygugu

MaxQuant GUI

1

hi! is possible to open MaxQuant GUI in linux? thaks!

fedeserral