maxquant_linux_guide icon indicating copy to clipboard operation
maxquant_linux_guide copied to clipboard

MaxQuant GUI

Open fedeserral opened this issue 1 year ago • 1 comments

hi! is possible to open MaxQuant GUI in linux?

thaks!

fedeserral avatar Apr 09 '24 18:04 fedeserral

Back when I wrote this I never tried, but maybe it's possible to run the GUI via WINE or another wrapper. I'm not sure if it's supported now - it's been a while since I've used MQ.

What I used to do was use a MaxQuant GUI instance on Windows to configure my mqpar.xml file, just so I didn't have to edit it manually in a text editor. Then I would transfer the mqpar.xml file to Linux, adjust the file paths, and run it there

Hope this helps!

atc3 avatar Apr 09 '24 22:04 atc3