Andrew Ramsay
Andrew Ramsay
When looking into the cause of [this issue](https://github.com/andrewramsay/ical_to_gcal_sync/issues/20) I found that icalevents currently doesn't use the TZID parameter that can appear within the DTSTART/DTEND iCal properties. There's a sample .ics...
This PR is about replacing the original custom LLM implementation in OAT with HuggingFace's [Text Generation Inference](https://github.com/huggingface/text-generation-inference) framework. The core change here is refactoring OAT's architecture around LLM requests. In...
I wanted to make a couple of changes to the `ProtoDB` class in the TGI branch and realised we have 2 copies of this in `shared/utils/aws/proto_db.py` and `shared/utils/aws/new_proto_db.py`. Only `new_proto_db.py`...
Add the option to parse a user-supplied list of strain labels for a given dataset (in addition to the regular strain_mappings.csv file), and during loading optionally discard any metabolomics objects...
In addition to #11, it would also be important for the output from nplinker to include all the information required to reproduce the results. This could include at least: -...
At the moment we can group spectra according to the molecular family ID that comes from the GNPS output. But we should be able to handle any form of grouping,...
what kind of output (and in what format) should we provide the user. Simon's initial thought would be that for any pair of GCF and Spectrum (or group of spectra,...