Alex
Alex
#### Reference Issues/PRs See previous discussions #2884 and #2805 with previous examples of integrating kotsu into sktime by @TNTran92 and @DBCerigo The current PR is intended to provide an example...
Hi - thanks for the great library. I'm interested to know whether there is a way to do the mmseqs (bucket-based 'diversity-aware') filtering that is used by default in ColabFold...
The PDB Atom Iterator [documentation](https://biopython.org/docs/1.75/api/Bio.SeqIO.PdbIO.html#Bio.SeqIO.PdbIO.PdbAtomIterator) states that residue numbers are added to the annotations, however they are not. ### Setup I am reporting a problem with Biopython version, Python version,...
**Is your feature request related to a problem? Please describe.** Hi, I really like the look of this library and am interested in using it in the context of optimization...
Hi - thanks for this amazing tool. I am interested to know the exact meanings of the values that are returned in the sequence headers in the a3m files, and...
To allow users the choice between e.g. gloo and nccl Is there any reason not to support this?
This is an attempt to fix the error encountered when running predict.py using the MSA Transformer on the example data provided in examples/variant-prediction/data (#458) The reason for the current error...
Hi, thanks for the great library - just wondered whether this api change might be more natural?
Hi, I'm curious about the comparison between performance on pdb and afdb validation sets. How was the pdb validation set constructed? Did you just filter uniprot ids in the existing...
### System Info latest transformers ### Who can help? @ArthurZucker ### Information - [ ] The official example scripts - [x] My own modified scripts ### Tasks - [ ]...