andrew e. davidson

The following works but seems like a hack. There is probably a better way to do this using native pandas ``` def findIntersectionElements(geneSetsDict, geneSetsUpsetPlotData): retDict = dict() retSingleSetDict = dict()...

I am running into the same bug on Terra. Not sure what version of Cromwell it is using. My wdl validates however, I get the a run time error ```...

really weird. It looks like cromwell is able to run my docker container based on output and log files. It seems like I can ignore the error. seem like a...

Hi HeeJae I work on mac os and linux. Node.js has different paths. Is there a way I can specify the path for each environment separately? Kind regards, Andy From:...

Hi Heejae Sometimes I do all my work on my mac using the local file system. Other times I start vscode on my mac and use remote. For example here...

Thank you From: Heejae Chang ***@***.***> Date: Tuesday, May 7, 2024 at 10:51 AM To: microsoft/pylance-release ***@***.***> Cc: andrew e. davidson ***@***.***>, Author ***@***.***> Subject: Re: [microsoft/pylance-release] pylance JavaScript heap...

It turns out the syntax change https://github.com/openwdl/wdl/blob/main/versions/draft-2/SPEC.md#scatter--gather I wonder if the documentation could be improved? all the examples I found by googling things like 'wdl array iteration' found links to...

Thanks, George I need to create some current traces. ONT support recommends I use https://github.com/Psy-Fer/SquiggleKit . It requires Python 3.6. The package dependencies do not work with with more recent...