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Hi Lars you are right, I ran `tsebra.py -k TSEBRA.gtf,liftoff.gtf --cfg default.cfg --out union.gtf` according to what you said, and when he ran a long time later, it showed something...

Hi Now this problem occurs, is there no "CDS" area in my annotation file? Also, I want to know whether the two input annotation files need to be processed in...

Dear Lars Thank you for your reply！ As you said, the "gene_id" of the "gmst.out" and "cupcake.collapsed.gff" files are indeed different. So what should I do next? Best,Yulong ------------------ 原始邮件 ------------------ 发件人:...

I have solved the problem as you said, thank you very much Best,yulong

Thank you for your reply！ Your suggestion is right and I understand your approach. Using Sniffles2's genotyping results instead of graphAligner/vg's results may be a good choice. But because a...