ZDW
ZDW
> I'm using Bandage v0.8.1 with the file `assembly_graph_with_scaffolds.gfa` (formerly `assembly_graph.gfa`) produded by SPAdes (don't know when this file was introduced). > > At the end of the file, the...
Has it been fixed? I am still suffering from this issue.
> What diamond version are you using? I tested v2.0.9, v2.0.14, and v2.0.15. None of them worked for me. My file "cluster_288" is > >bgc100078__5001:5210:- > MKNQLNFEILSDEELQGINGGIRGTGKGLAAAMVSGAAMGGAIGAFGGPVGAIMGAWGGAVGGAMKYSI > >bgc45988__29:238:+ >...
> Please clarify, you did not find hits or you got the error message as described in the title? Did not find any hit, but no error or warning like...
> --masking 0 It worked now. Many thanks!
Hi, I have a question about how to rationally consider both the identity and coverage, when assigning my assembled genome to the reference database? Say, the examples are as follows:...
Hi, has the current version (0.1.29) been updated to MiBiG 2.0? I cannot find the MiBiG information for my deepbgc?
I forgot attaching my command, which was `nohup agb.py -a SPAdes -o ./H13_4 -r GCF_000010245.2_ASM1024v1_genomic.fna -t 6 -i ../H13_4/ &`
> I've got the same issue. Anyone wanna share a solution? Many thanks. > > I'm using Krakenuniq with the pre-built database downloaded from https://benlangmead.github.io/aws-indexes/k2, the 384G one EuPathDB48, to...
the same issue I encountered, have you figured it out?