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                                            V-Catherine

[E::bwa_idx_load_from_disk] fail to locate the index files

Hi, Thanks for your answer. The reference genome I use is GATK's hg38. As for the genomes I'm working on I need to check if I'm allowed to share them...

[E::bwa_idx_load_from_disk] fail to locate the index files

Hi Jeremiah, Thanks for your message. I re-indexed first with bwa (`bwa index Homo_sapiens_assembly38.fasta`) but I got the same error. This is why I then also indexed with samtools (`samtools...