Anthony Bertagnolli

sklearn.ensemble._forest can't be found

6

## Short description of the problem Getting the following: ModuleNotFoundError: No module named 'sklearn.ensemble._forest'. I tried installing this with pip, which says it can find it. This error occurs when...

DRAM_setup.py error

1

greetings, having some trouble setting up the databases required for DRAM. Trying this through an SGE submission queue. I've attached my submission (DRAM_setup.sh) and the output log (DRAM_setup.log). Any assistance...

AttributeError: 'NoneType' object has no attribute 'replace'

1

greetings, i am running phylophan on an SGE-type server. i believe i have performed the installation correctly, as the below command works: ``` phylophlan -v PhyloPhlAn version 3.0.60 (27 November...

convert output matrix to triangular format in R

1

greetings, i enjoy using simka but i have a question regarding manipulating the output files. specifically, is there a way to convert the 'mat_abundance_braycurtis.csv' into a triangular lower matrix. i'm...