Giulio Benedetti

Thanks for all the useful remarks! As @federicomarini pointed out, I will give it a go with the help of your documentation and keep you up-to-date on the progress. Good...

Hi! I finally started working on this idea. An initial working package is available here: [iSEEtree](https://github.com/RiboRings/iSEEtree). For now, there is a new panel which shows a phylogenetic tree for the...

> Actually, could you do me a favour and list links to pieces of documentation that you have been using? Initially I tried to follow the "worked examples" here: https://isee.github.io/iSEE-book/....

Link and text of pr https://github.com/microbiome/OMA/pull/390 Hi! Before switching to BiocBook we were considering to add foldable solutions to the exercises. Here I added solution chunks to a couple of...

Hi! In theory, this should be working in the current version of the book. However, the folded code doesn't appear in the chapter. Not sure yet what the problem is.

The reason could be that code folding is only supported by executed code chunks: https://quarto.org/docs/output-formats/html-code.html Maybe we could run the code in the examples, or if that takes too long...

For some reason, the folded chunks appear locally, but they are not rendered in the online version of the book. Below is a picture of what is looks like when...

Some possible actions: - test if chunk appears in the online book when setting `EVAL = TRUE` (also precede all lines with `#` so they don't execute - understand why...

Thank you @ake123 Then in principle if someone is willing, they can add solutions to selected exercises in preparation for summer schools and courses as shown in [the comment above](https://github.com/microbiome/OMA/issues/297#issuecomment-1936052614).

That would be super useful! @antagomir mentioned that we might need to consider whether it makes sense to add solutions to all exercises, or if it is only necessary for...