Tadej Satler, PhD
Tadej Satler, PhD
**Problem** Since last week, we had problems with running dynamight with relion 5.0. Error we get seems to be related to dynamight code installed with relion5. Has anyone experienced similar...
Hi, This pull request implements the `--initial-guess` feature, inspired by the functionality available in [ColabDesign](https://github.com/sokrypton/ColabDesign/commit/6f0a8763a533636e801935e90076c1a386c0ddba). ### Related issue: - #432 ### Description: - It enables the handling of protein structure...
Would it be possible to implement an `--initial_guess` feature , similar to what is available in [ColabDesign](https://github.com/sokrypton/ColabDesign/commit/6f0a8763a533636e801935e90076c1a386c0ddba)? Thank you so much!
Hi, In this pull request, I've incorporated support for [CtfFind5](https://www.biorxiv.org/content/10.1101/2024.02.26.582023v1.full) to enhance our local workflow. If this addition could benefit others, please consider merging it. ### Related issues - https://github.com/3dem/relion/issues/1088...
This pull request addresses an issue in the `optimize_inverse_deformations.py` file by adding a missing import (**is_relion_abort**) and implementing exception handling for the script.
Hi, I've been testing DynaMight on a set of particles from empiar (10028). I downsampled the particles from box size 360px to 128px with` relion_image_handler`, and prepared a refined model...
### Description: We specified 150 epochs for training, but the process is continuing beyond this limit and reaching up to 200 or even 203 epochs. Does anyone have an idea...
**Describe your problem** When running a 3D Initial Reference job, it starts processing but fails after some time with the error: `prior on psi is zero!`. Restarting the job usually...