Tadej Satler, PhD
Tadej Satler, PhD
Yes, It was working 10-14 days ago. We reinstalled relion with the latest changes in branch 5.0, and somehow it does not seem to work anymore. Is it possible that...
We also tried to rebuild RELION and it did not work. Seems like `dynamight.deformations.optimize_deformations_rigid` module is missing, which was added recently: https://github.com/3dem/DynaMight/commit/5760613f094e17c768b6f0eec81bccfbca9cc569
changes fixed the issue, thanks!
I added some code to support CtfFind5 in my relion fork: - https://github.com/3dem/relion/pull/1098 - [Poko18:ver5.0](https://github.com/Poko18/relion/tree/ver5.0) P.S. currently its still missing GUI
@chewyalvin You could install relion from my fork. Beware that CtfFind5 is not integrated in GUI, but you can use it from command line
That worked, thanks!
If it helps, here is already a similar implementation in [gradio](https://huggingface.co/spaces/simonduerr/RFAA) for RFAA.
***This update enables the handling of protein structure inputs (.pdb and .cif) using the AlphaFold parser.*** - You can now use ColabFold with .pdb or .cif input - You can...
Initial guess is working, although we are unable to use pdb/cif files as an input anymore (instead of .fasta, .csv ...). Not sure if this was intended or not
It might be my outdated testing script! I'm glad to see this merged!