Vitaly Voloshin
Vitaly Voloshin
No, as I said, all files generated (including seq1.predict.s5.score.txt) are empty.
I am glad to hear that you managed to find and fix this small bug. As I said before, I ran SVision in Docker (using the image provided by you)....
Here my local git log:  So, the last commit from 21 September. `out_score_file.close()` is in line 302 of the ./src/network/predict.py. Because I built my own docker image and it...
Hello! You can find the example that I use here: https://yadi.sk/d/xDvDTW9sVCWYlA These are purely generated sequences. Ref has the following blocks: s1Long - s1 - s2 - s3 - s4...
If you look at the original post in this issue, you can see that `--contig` was used for my case. It was always used when I tried my case. I...
@wasade Thanks to looking into this issue. I attached a short [gff file](https://github.com/biocore/scikit-bio/files/11396165/example.gff.txt) (it is example.gff.txt because GitHub does not like gff extention), which contains one gene with its related...
Just an update. I changed the Spades version to 3.15.3 and now it is python error from PyYaml module (known issue in PyYaml v3). ``` Traceback (most recent call last):...
OK. I tried to build 3.15.5 and after building it seems to be working fine. You probably would like to state which system the pre-built binaries are compiled for and...
Just to add to this... I get running version on github pages ([pigrenok.github.io/command-line-bootcamp](pigrenok.github.io/command-line-bootcamp)) and whereas locally with local server it works (with requests to the same server at least), on...