Onkar Mulay

Please let us know, were you able to solve @Author @jqmp

I am trying running it manually not using any functions

Can anybody please explain me the data, that is available at https://www.spatialresearch.org/. Thnx in advance Integrating spatial gene expression and breast tumour morphology via deep learning (2020) DOI: 10.1038/s41551-020-0578-x

Thanks @akahles, adding -v solves that particular error, but gives another error: File "h5py/_selector.pyx", line 272, in h5py._selector.Selector.make_selection File "h5py/_selector.pyx", line 201, in h5py._selector.Selector.apply_args TypeError: Indexing elements must be in...

**Code:** #!/bin/tcsh #PBS -l walltime=12:00:00 #PBS -q normal #PBS -l jobfs=1gb #PBS -l mem=64gb #PBS -l ncpus=32 #PBS -P zq45 conda activate /scratch/miniconda3/envs/Spladder spladder test --conditionA /scratch/Spladder/Code/MixA.txt --conditionB /scratch/Spladder/Code/MixB.txt -v...

Hi @akahles, Any updates on how to solve the error of: File "/scratch/miniconda3/envs/Spladder/lib/python3.6/site-packages/h5py/_hl/selections.py", line 82, in select return selector.make_selection(args) File "h5py/_selector.pyx", line 272, in h5py._selector.Selector.make_selection File "h5py/_selector.pyx", line 201, in...

Can you let us know now? Have you updated?