Lucas446

Does are the my biases file I use: [NB_St10_20Kb.biases.gz](https://github.com/ay-lab/dcHiC/files/11153177/NB_St10_20Kb.biases.gz) [NB_St14_20Kb.biases.gz](https://github.com/ay-lab/dcHiC/files/11153178/NB_St14_20Kb.biases.gz) Thank you

Hi, I looked at the ay-lab/fithic/issues/54 and it think my biases file doesn't have the right format Format from ay-lab/fithic/issues/54 : ``` zcat fat_5000.fithic.bias.gz|head NC_052532.1 2500 0.447834 NC_052532.1 7500 0.098977...

Ok thanks, I have error when using hicpro2fithic.py, I will posted them in hicpro github

Here is my fithic error: ``` python3 fithic -i DifferentialResult/diff_analysis/fithic_run/NB_St14_r1_20Kb_fithic/interactions.txt.gz -f DifferentialResult/diff_analysis/fithic_run/NB_St14_r1_20Kb_fithic/fragments.txt.gz -t /Users/tlucas/dcHiC/RESULTS/biases/NB_St14_r1_20Kb.biases.gz -U 10000000 -o DifferentialResult/diff_analysis/fithic_run/NB_St14_r1_20Kb_fithic/fithic_result -r 20000 File "/Users/tlucas/.pyenv/shims/fithic", line 3 [ -n "$PYENV_DEBUG" ] && set...

Ok I managed to fix the syntax error replacing in dcHIC.r script line 1495 python3 path by "bash" previous: `cmd

Hi, I have the same issue as @knight-hzj (not equal indices...), but when I wnat to do sync_indices function I get: ``` synched