Laura-Alex

Thank you for your help. Unfortunately, it didn't quite work... I previously trimmed the data with khmer. The only thing I didn't do before is gzip it. I also removed...

I had a look with Krona. It is indeed a far more diverse sample than the Hu et al. sample used in the spacegraphcats paper (https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR6462984&krona=on versus https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR1976948&krona=on). I was...

Current update: radius of 10 ran out of memory using at first 240, then 480GB of memory. I haven't tried r5. The alternative, less diverse dataset that I was considering...

Just wanted to note that I got exactly the same bug. Help would be appreciated.