KaiLi-2324

Questions about fluxmap

6

Hi, @ckmah . Thanks for developing Bento. I am running Bento on my own Xenium data and I got the following strange fluxmap. What might be the reason for this...

ValueError: could not convert string to float: ''

7

Hi, @ckmah . Thanks for developing Bento. When I was running bento.pl.shape_stats, I got the following error "ValueError: could not convert string to float: ''"  Could you help me...

ValueError: Input X contains infinity or a value too large for dtype('float64')

3

Hi, @ckmah . When I was running the function bento.tl.lp, I got the following error "ValueError: Input X contains infinity or a value too large for dtype('float64')." Could you help...

ValueError: You need to run `pp.neighbors` first to compute a neighborhood graph.

6

Hi, @dawe . Thanks for developing SCHIST. I got the following error "ValueError: You need to run `pp.neighbors` first to compute a neighborhood graph." when I was running the function...

Problem of reading dbit-seq image

1

Hi @LucaMarconato . Thanks for developing spatialdata-io, it is super helpful in processing spatial data. I wanted to use this package to process my dbit-seq data, but I had trouble...