VaMPy
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KVSlab
A collection of tools for pre-processing, simulating, and post-processing vascular morphologies.
* Added computation and visualization of kinetic energy, tuburlent kinetic energy, kinetic energy spectrum and spectrogram (currently u-component) * Added support of plotting single probes separately
Hello, I am trying to run the moving atrium simulation, but I am getting this error: Creating initial folders Loading displacement points Creating splines for displacement /home/lshahid/miniconda3/envs/oasismove/lib/python3.11/site-packages/scipy/interpolate/_fitpack_py.py:295: RuntimeWarning: The maximal...
Same problem as https://github.com/KVSlab/VaSP/issues/157
Hi @hkjeldsberg If I understand correctly, `save_frequency` is the time step frequency used during the simulation, while `step` is how often you want to save the outputs. https://github.com/KVSlab/VaMPy/blob/6c6468a4d8fcda89c330c9b01cea253e1bd3c8c3/src/vampy/automatedPostprocessing/compute_flow_and_simulation_metrics.py#L44 Here, `saved_time_steps_per_cycle`...
In most of the biomedical simulations, we would at least compute WSS. Therefore, it makes more sense that we compute WSS during the simulation rather than as post-process. Since the...
Hi all, When executing the vampy-mesh command we encountered the following error.  To fix it we have to modify the file vmtkmeshwriter.py in the function WriteDolfinMeshFile the part of:...
- `compute_flow_and_simulation_metrics.py` currently compute all the metrics. However, it is nice to add a feature that will allow users to choose which metrics to be computed.
- Save P2 solution at every timestep - by keeping/reusing the mesh information and just updating the solution only. - The above also needs to be updated in the Checkpoint...
In `Artery.py` the sampled velocity using probe points is saved to separate files based on the time step. This could be improved by saving all probes to a single file...