compute WSS during the simulation

[keiyamamo]

In most of the biomedical simulations, we would at least compute WSS. Therefore, it makes more sense that we compute WSS during the simulation rather than as post-process. Since the velocity is already available during the simulation, it should be computationally inexpensive to compute WSS on the fly.

[hkjeldsberg]

Thanks for suggesting this improvement @keiyamamo . This should be trivial to implement for rigid domain simulations. However, I have not been able to successfully compute WSS on a moving domain, which requires further investigation.

[keiyamamo]

I see! I did not think about it. Is it due to the fact mesh is updated in OasisMove?

[hkjeldsberg]

Yes, I have had issues with making FEniCS understand that the boundarymesh is updated for each iteration, resulting in errors of this kind:

Error: Unable to create mesh entity.
Reason: Mesh entity index -1 out of range ...