zhengjh

Could I use this method to infer cell type from samples which are not tumor samples, likes untreated and treated samples?

3

Hello, very great method! But I have normal and treated mouse hypothalamus scRNA-seq data and I wonder could I use this method on my data? Also, could sex bias affect...

Hello, thanks for developing CellChat~ Now, I have scRNA-seq and snRNA-seq in hand, and some celltypes are specificly in scRNA-seq data while some other in snRNA-seq, and I want to...

How to solve The standard deviation is zero?

1

Hello, when I run the sclink_net, I don't know how to solve the problem, could you please help me ? Error in eigen(sigma, symmetric = T, only.values = T): infinite...

which value to use from sclink_net function to generate the gene regulatiion network?

1

Hello, scLink is great package. But I am wondering which value can I use to generate the gene regulatiion network? Thanks

Selection of lda value

1

Hello, I am confused about the range of lad value and the selection of lda. I just select the lda which has the smallest bic value. And I found the...

Hi, I download the mouse_lr.txt file, but I can't find the Th_Thra Th_Thrb ligand-receptor. I am wondering why these lrs are not in the file? Thanks a lot for your...