Jérémy Berthelier

Errors while running xpore dataprep

7

Dear GoekeLab, I am trying to run xpore on the cluster of our institute, everythings goes well using the demo data, however I got this error/warning while running xpore dataprep...

How to connect via FTP on tne Virtual Machine to transfert my data

1

**Several people ask for that:** Here is my tuto **1)Firsly check your Network Configuration in VirtualBox for the PiRATE-VM** Select Global Settings from the File menu --> Select the Network...

How to set up the number of processor and slots for the tools TEdenovo, PASTEC and TEannot (REPET package) in PiRATE　： in a konsol: **sudo qconf -mq main** pasword...

‌Dear DENA team, I am opening issue because the email [[email protected]] do not works. I got my email back. I would like to know wich Araport11 version you used in...

Using updated nanopore flowcells for Arabidopsis ?

5

Dear DeepSignal authors, Thanks for this great tool ! I was wondering if we can use R10.4 flowcell or is it better to use R9.4 for Arabidopsis methylation calling ?...

Rarefaction curve plots with genes and transcript categories

1

Dear isotools authors, I am wondering if it is possible to display gene and transcripts for the rarefaction curve on the same graph. An example of figure : https://github.com/Magdoll/cDNA_Cupcake/blob/master/annotation/test_data/Rplot_test.all.gene_vs_isoform.min_fl_2.png Also...