Jérémy Berthelier

Hi sorry to come to the conversation, I have the same issue by trying to use your DENA tool. Best,

Dear Jack, Your welcome, Someone else reported me this same issue : "Fatal error: Exit code 1 () FATAL: Failed to open sequence database file /home/jeremy/galaxy/tools/Pipeline/MGEScan/WORK/output/f/output1.pep Usage: hmmsearch [-options] Available...

Hi Jack, Thanks for the report, Unfortunately, I do not have any idea to fix the problem. I get the exact same "error" message with Arabidopsis genome but I obtain...

Hi Jack, Sorry for my delay, - Yes you can use mgscannonltr in an other linux and transfert your fasta file in the VM and after dowload the file (with...

Thank you Dr King for you message. Please let me know if this trick also solved your problem. We will take this point in account for the new version. Best...

Dear vtrinca, Sorry for my delay, This is the first time I see this warning. I think there is probably nothing wrong regarding your management of the file, transfering files...

Dear Khanyap4, Thank you for your message, Yes you have to use the gff3 file obtained with the second run of TEannot. However, I am a bit surprised that you...

Dear pwkooij and avkermanov, Sorry for my late answer, It is difficult to me to help you with these few lines of error. Can you share the log information ?...

Dear pwkooij, If the process stop after a couple of minute, there is lot of chance that it is cause by the the input file, PASTEC/TEdenovo/TEannot are caprisious if there...

Ok, it's re-open, good luck with the quarantine! Best regards, Jeremy