Hesham Amin

converting otu_table.csv format to otu_table.qza

1

I am new to microbiome data analysis I am trying to use DEICODE to generate distance matrix. Is there way to convert otu_table generated by R and dada2 pipeline otu_table...

If I have phyloseq file instead of example data how I show start

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Hi Guys So I am new to lefse analysis, I start using lefser I am starting with phyloseq file then I produced otutable and with a metadata file I made...

ancombc2 output fmt length exceeds maximal format length 8192

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I tried to do an ancombc2 comparison between 2 groups on a genus level. When I don't filter out low abundance taxa or using filter down taxa below 0.01%. Only...

First thanks a lot for developing such work package in R. I am conducting correlation study between indoor air bacteria and four meteorological variables (Temperature, relative humidity, precipitation and wind...