Han-zh210

Results 6 issues of Han-zh210

Hi! I have 5 different values for time, but with draw_trajectory_heatmap it only draws 4 different time, How can I fix it? Thanks!!! ![image](https://github.com/user-attachments/assets/74cafea6-21b4-45dd-82cc-007ed5672590) ![image](https://github.com/user-attachments/assets/f4a554c7-d6d5-4e3c-93d5-26547cf9a4bf)

Hi!Thank you for developing the PHATE package!! And I'm curious about whether EBdata could be used for trajectory inference?Is there any time label that could be used to evaluate metrics?...

question

Hi!I'm always frustrated whether scprep.utils.combine_batches could remove batch effects? `EBT_counts, sample_labels = scprep.utils.combine_batches( filtered_batches, ["Day 00-03", "Day 06-09", "Day 12-15", "Day 18-21", "Day 24-27"], append_to_cell_names=True ) del filtered_batches # removes...

enhancement

Hi!I saw in your paper‘s supplementary material that you labeled the EBdata with different numbers of days. such as day 00-03,Could you please tell me where I can find these...

Hi!Thank you for developing PHATE package!! And I'm curious about whether EBdata could EBdata used for trajectory inference?Thanks!!

question

Hi! Thank you for developing the package. When I run the code below: ``` library(compareGroups) data("regicor") head(regicor) descrTable(~age+sex+smoker,regicor) descrTable(year~.,regicor,show.all=TRUE) tab=descrTable(year~.,regicor,show.all=TRUE) tab_sex=strataTable(tab,"sex") tab_sex setwd("D:\\rcode\\gs") export2csv(tab,"table2.tsv",sep='\t') export2csv(tab_sex,"table3.tsv",sep='\t') ``` export2csv(tab,"table2.tsv",sep='\t') works,and export2csv(tab_sex,"table3.tsv",sep='\t') comes...