André Soares
Would be helpful to be able to get taxonomy outputs from BLAST searches within Bandage for metagenomes, mainly. This would allow easy selection of contigs by taxonomic assignment but also...
Hi there, Having set up `alphafold` in my machine (NVIDIA GeForce RTX 2080 GPU, ), which I've tested successfully, I'm now coming across the error below running it on a...
It would be interesting for visualization purposes to have the unused spots (default grey) in other colors. In my case, the coloring of the rows makes these hard to notice....
I honestly haven't found any evidence online for future implementations of `bowtie2` on GPU. Is this planned at all?
Thanks so much for your work in this tool and for this in advance - you guys are the best! ## Short description of the problem Running `anvi-cluster-contigs` with `DASTool...
## Short description of the problem Running `anvi-display-metabolism` I get a server address that uses RAM and CPU associated to the python process but won't show anything. ## anvi'o version...
Hi there, Running miniasm with seemingly good contigs and mappings (below), I'm getting unitigs where all bases are N's. How can this be improved? Thanks! Example output ```.gfa```: ``` $...
Hi there - no reprex to provide here - I couldn't find in your documentation or wiki a reference as to how style "fisher" is calculated in function `bi_class`. Would...
Hi there @althonos , Thanks so much for your work on this tool, it's just great! I'm using `pyrodigal` to generate GBK files from some MAGs I curated that I...
How about introducing support for generation of .svg images of Sankey diagrams? Cheers, André