Davide Bressan

icon indicating a website link https://davidebrex.github.io/

icon company University of Trento icon location Trento - Italy icon location Postdoc researcher, Bioinformatician - University of Trento (ITA)

Results 3 issues of Davide Bressan

Genomepy install gets stuck

Hi, Thank you for this helpful tool! I run it in a snakemake pipeline with all the tools within a singularity container. A rule of the pipeline downloads the mm10...

Conda error while using conda envs within container

2 comment

**Snakemake version** 7.31.0 **Describe the bug** On my local machine, I developed a pipeline with conda envs and it runs. Now, I wanted to test the pipeline on another machine...

bug
stale

Only AMB as BEST output

Hi, I ran demuxlet on four samples obtained from a mix of 11 donors. I am trying to assign the donor to each cell in the scRNA-seq. However, almost all...