AndreasK
AndreasK
I am having trouble removing extinct plant families from this list: `gbif_downstream(id=7707728, downto="family")` I had to loop through the list using rgbif::name_lookup to get the desired information. I am not...
I am really sad I can not access the advanced ggrepel options.  This looks not so good. In ggtree I can set angle="auto" and it always points outwards. Is...
read_xml ignores relative paths ```r #fails: read_xml(x = "./temp/rbcl_from_0_raw.xml" ) Error: './temp/rbcl_from_0_raw.xml' does not exist in current working directory ('D:/R/ACG'). #works: read_xml(x = paste0( getwd(), "/temp/rbcl_from_0_raw.xml") ) ``` [rbcl_from_0_raw.zip](https://github.com/r-lib/xml2/files/9046911/rbcl_from_0_raw.zip) >...
``` > install.packages("RMySQL", type="source") Installing package into ‘C:/Users/gf1954/Documents/R/win-library/3.4’ (as ‘lib’ is unspecified) trying URL 'https://cran.rstudio.com/src/contrib/RMySQL_0.10.15.tar.gz' Content type 'application/x-gzip' length 52728 bytes (51 KB) downloaded 51 KB * installing *source* package...
My test is stuck since one hour at: [Merging datasets ] 81.8 % elapsed: 0 min 1 sec remaining: 0 min 0 sec cpu: 0.0 % mem: [ 11, 11,...
Say I have 2 very small genomes snippets (5000 bp) per species from different individuals, and I have a total of 5000 species and use a k-mer size of 10....
I just installed the package and tried your example but it failed (I used my own data). ``` bip_railway(mydata, label=T) Error in loadNamespace(x) : package ‘ggnet’ not found #translated from:...
Hi, I am trying this command: ``` E:\ONT\dorado-0.5.2-win64\bin\dorado.exe basecaller E:\ONT\dorado-0.5.2-win64\bin\[email protected] E:\ONT\reevaladapter\pod5 --min-qscore 7 --emit-fastq -v --barcode-arrangement arrangement.toml --barcode-sequences barcodes.fastq --device cuda:all > E:\ONT\reevaladapter\barcoded.fastq [2024-01-25 23:52:22.382] [info] - Note: FASTQ output...
I cancelled the loading after 5 hours. It takes 15GB of RAM for that? [consensus_iter.fasta.splits.zip](https://github.com/husonlab/splitstree6/files/12403903/consensus_iter.fasta.splits.zip)
I had a problem with orient.fwd because my UMI primer goes like: DBHVDBVHDHBVACBTRGTGTGAATTGCAGRATC I was very sad this did not support any IUPAC characters. I made a duct-tape solution by...