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I get a write error:

3

I get a write error: `Above error raised while writing key 0 of from /.` if a name of the index to the var table is an int. Setting the...

error: write h5 file fail

1

ad.write(filename='ab.h5') I used SCCAF but find this problem ,can you help me? thank you OSError Traceback (most recent call last) d:\program files\python37\lib\site-packages\anndata\_io\utils.py in func_wrapper(elem, key, val, *args, **kwargs) 187 try:...

assembleContigs question

9

Hi, Why does the first clone targetSequence have different lengths in the same sample with different sequencing data? I want to understand how `AssembleCotigs `work. Is the original sequencing data...

Error in hclust(d, method = method) : size cannot be NA no

2

Hi @guokai8 ``` > p=Heatmap(res,group_by="celltype_major") Error in hclust(d, method = method) : size cannot be NA nor exceed 65536 ``` Thank you for the package.And how to fix it

at file ../Core/cholmod_dense.c, line 102

4

Hi @guokai8 `Error in asMethod(object) : Cholmod error 'problem too large' at file ../Core/cholmod_dense.c, line 102` Thank you for the package.And how to fix it

--dpad --gbar

2

Hi, I'm reading the manual I don't know what's going on here, but if there's a problem, how can I solve it myself? Can you explain? Or provide relevant literature,...

--no-mixed --no-discordant

1

Hi, ``` --no-discordant --no-mixed --no-mixed --no-discordant ``` I want to know which parameters are used in what kind of analysis scenarios. Thanks

Starting from a Seurat object

1

Hi, In tutorial ``` data.input = “5.0.0”, get the normalized data via `seurat_object[["RNA"]]$data` labels

ImportError: cannot import name 'LightningLoggerBase' from 'pytorch_lightning.loggers'

1

Hi, how do you make software work? ``` solo -h Traceback (most recent call last): File "/root/miniconda3/envs/solo/bin/solo", line 5, in from solo.solo import main File "/root/miniconda3/envs/solo/lib/python3.12/site-packages/solo/solo.py", line 17, in import...

Hi, Can simple single cells use scenicplus? Are there any related tutorials ? I don't have a consensus_regions.bed file