zy041225
zy041225
> i meet the same error message. how did you fix it ? no, but I got it run on the web server. you could try that.
Hi Andrea @RenzoTale88 , I also met the same issue when lifting the clawed frog geome from Xenopus laevis genome v9.1 to v10.1. I have used your fixed branch and...
yes, I clone the mmap2_test branch but still meet this issue.
What command should I run to get the information you need?
It was run on a SLURM cluster.
I put the command in a shell ``` #!/bin/bash conda activate nf-LO nextflow run /home/zhouyang/software/nf-LO --source PATH/Xenopus_laevis.v9.1/nf-LO/Xla.v91.repeatMasked.fa --target PATH/Xenopus_laevis.v9.1/nf-LO/genome.fa --outdir outDir -profile local --aligner minimap2 --distance near --tgtSize 10000000 ```...
Thanks @RenzoTale88 , by setting the memory to 300 Gb the run succeeded.
Hi both, I'm also interested in performing a cross-species comparison with chess. I wonder if the whole syntenic blocks can be used in chess, or I should splice each of...