Jack

Hi, Thanks for this robust tool. I found the last sample in my output_corr_matrix.txt is always missing and the same as in the dendrogram. It looks adding the last sample...

Automatically double the initial allocated memory amount for a rule for each retry attempt

5

For my snake make pipelines, the memory amount and other cluster resources for rules are defined in a configure file, like cluster.yaml. I feel frustrated that I have to wait...

Clustering plot is a flat line now with the version 1.0.0 and 1.0.1

1

I found the clustering plot at the end is a flat line now with the versions 1.0.0 and 1.0.1. The problem is with output_corr_matrix.txt, which diagonally has all '0' in...

Error with mirabait -j rrna

2

Hi, I am trying to run the following command with mira_V5rc1_linux-gnu_x86_64_static: `mirabait -j rrna -I -p $file1.fastq $file2.fastq` The dbdata folder had rfam_rrna-21-1.sls.gz and I changed it to rfam_rrna-21-12.sls.gz. I...

Can not use bed track with glactools bam2acf

1

Hi, Thanks for the grear program. It looks like I cannot use bed track with glactools bam2acf: $ glactools bam2acf --bed $bed $ref_fa $bam test | glactools view - |...

Exception in thread TaskFileWriter-Thread:

7

Dear author, Thanks for developing this software. I re-aligned my bam files with the provided reference genome, then ran Accucopy docker image with Singularity following the instructions, but I always...