zhang919

Dear @iprada, Thanks for your reply and patient advice. I recheck and sure I am using the lastest version installed from conda version=1.1.4, and this is my envirment: ``` >...

Dear @iprada, I have run circle-map without seqtk, but it looks like not work. I also see many warning like this: > /home/user/miniconda3/envs/trim/lib/python3.7/site-packages/circlemap/utils.py:728: UserWarning: WARNING: Could not compute the probability...

Dear @iprada ， Thank you for your quick response, you are right , I am currently using the data saved on the SRA to verify some results，so you can download...

Dear @iprada, I'm sorry to ignore your mail because outlook puted your mail to unimportant mail folder along with a lot of advertising mails automatically. Unfortunately, because I haven't seen...

Dear @iprada, Thanks for your attention, after read your reply, I am trying apply Circle-map on standard WGS data. Fortunately, It works better than expected, I got average 10000+ candidates...

Hi @iprada I'm sorry to ignore this point. I got about 100-200 circles from the split reads > 2 filter.

Dear @virajbdeshpande @jchenpku @YaCui , I may have the same problem recently. If you have solved this problem, could you please give me some suggestions? Best. Zhang.