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                                            colvip

[BUG] A YAML file argument cannot be used in combination with either the -s/--organism or -g/--genome arguments. The -s/--organism and the -g/--genome arguments replace the YAML file argument input.

The bug is: pgap.py: error: Invalid Command Line Argument Error: A YAML file argument cannot be used in combination with either the -s/--organism or -g/--genome arguments. The -s/--organism and the...

PGAPX-1411