Yibei Chen

Pairwise bootstrap ISC doesn't work

6

Hi, I'm using `bootstrap_isc` with `pairwise=True`. The first time I ran it, I got the error from `assert np.allclose(voxel_iscs, voxel_iscs.T)` because my `isc_data` has nan. When we do a comparison,...

when creating the 7th tutorial (two-level glm) for pydra, see [this PR](https://github.com/nipype/pydra-tutorial/pull/34) and [this issue](https://github.com/nipype/pydra-tutorial/issues/33), we found that pydra is strict with its task input. > if the task input...

adding PySceneDetect to plier

5

Happy New Year! This is a follow-up to discussion with @adelavega on Mattermost. In case of shot detection or segment detection, Google API has crushed a lot when dealing with...

Add datalad task

1

## Types of changes - New feature (non-breaking change which adds functionality) ## Summary as discussed with @djarecka, add datalad interface (adopted from mriqc) to pydra task ## Checklist -...

input is too complicated to be hashable

1

when debugging [first-level glm for pydra tutorial](https://github.com/nipype/pydra-tutorial/blob/2a08fba3e254f4e7e2b187d5955421c3fcbbaf00/notebooks/6_firstlevel_glm_nilearn.md) we (@yibeichan @djarecka) encountered an error related to hash for a specific node. Node: ``` # get glm report @pydra.mark.task @pydra.mark.annotate( {'model': ty.Any,...

WIP - BEP 028 prov

6

This PR was made during the 2024 BIDS meeting in Seattle after discussions with @effigies, some other discussions can be found here #https://github.com/bids-standard/BEP028_BIDSprov/issues/129 BEP028_prov doc see [here](https://docs.google.com/document/d/1vw3VNDof5cecv2PkFp7Lw_pNUTUo8-m8V4SIdtGJVKs/edit) ## Types of...

Make uploaded predictors deletable & ability to make public

3

**Describe the bug** In the [document](https://neuroscout.github.io/neuroscout-docs/web/upload.html), the uploaded predictor visibility is `public`. But there is no option regarding setting this visibility when uploading predictors. And, by default, I got `private`....

mp4 video rendering errors during annotation

3

**Describe the bug** I wanted to use the "video object tracking" template to annotate a video, but I keep getting "video rendering errors" in the annotation user interface. I tried...