Youri Hoogstrate

Results 14 comments of Youri Hoogstrate

Hi @iburinoc @Cyan4973, From looking into the git history, I think you are the most technically grounded committers regarding this part of the codebase. Would you like to take a...

@ CentOS this helped me through: ``` sudo yum install proj.x86_64 \ proj-static.x86_64 \ proj-devel.x86_64 \ gdal-devel.x86_64 \ gdal-libs.x86_64 \ gdal.x86_64 \ openssl-devel.x86_64 \ openssl-libs.x86_64 \ openssl.x86_64 \ sqlite-devel.x86_64 \...

This is a strange bug. I have the same - tried to merge a Seurat object created from regular files with one from a converted h5ad. It seems to 'work'...

within zstd there is some lib/common code that is not included in their lib file, using a submodule seems necessary at this point

Closing this in favor of a superseding PR by @daniellerozenblit

Are we talking about Rna 2d structure and which deadline? I won't be able to find Time this weekend

You could set --temp-dir to /dev/shm/ to effectively write to temporarily to RAM and avoid additional IO. Interesting discussion on how to proceed with random access. I may need this...

> @yhoogstrate I somehow missed this comment. It's a good idea to use /dev/shm/ when possible. I added it to the manual ( https://github.com/KirillKryukov/naf/blob/develop/Compress.md#temporary-storage ). Thanks! I will try to...

I guess this one needs a patch too: https://github.com/FoxoTech/methylprep/blob/master/requirements.txt @marcmaxson @notmaurox could you look into this free bug fix/patch? Clean installs are breaking due to dependency problems w/ pandas