Yuandong Xing

Hi, I am running generatedecoytranscriptome.sh. But this step seems very time-consuming, so I submitted to slurm for execution. How long does it take to finish it? I applied for 1...

[Feature] Organize kraken2 minimizer data

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### Checklist - [x] There are [no similar issues or pull requests](https://github.com/taxprofiler/taxpasta/issues) for this yet. ### Problem Hi taxprofiler group, Thank you for building this practical tool! I am using...

Hi Lin, Thank you for developing this helpful and user-friendly package! I have a quick question. When doing trend test, how does ancombc2 set the reference group? I guess it...

DNA quant for

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Hi Benjamin, Thanks for your time on developing and maintaining this package. It is exactly what I need! I have a metagenomic dataset. My quick question is: for the input...