Yasmina Kermezli comments

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                                            Yasmina Kermezli

ERROR-get_tx_seq : No genes were found on chromosomes defined in fasta file.

oh yes sorry, 1- my lines start by > (I did'nt paste it) : >1 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 2- the error message is the same in the subject : |-- 16:50-ERROR-get_tx_seq...

ERROR-get_tx_seq : No genes were found on chromosomes defined in fasta file.

Yes I found it The probleme was in some unlocalized genomic contigs (like >GL456211.1 ...) I deleted them and it works now Thanks Denis!