Chang Ye

Results 51 issues of Chang Ye

the output ![image](https://user-images.githubusercontent.com/5415510/30527350-3151bf6a-9c5a-11e7-83f3-e1456e68e523.png) expected result ![image](https://user-images.githubusercontent.com/5415510/30527355-40a9ffb8-9c5a-11e7-9966-d828418a7d8b.png)

It has been mentioned in the docs that cutadapt modify the reads in a certain order. But it might not be suitable for some applications. For example, adapter will be...

feature-request
API

It is very common that sequencing reads carry UMI index on the 5' or 3' end. If the UMI sequences are fix in length, by using `-u` argument, the UMI...

```bash 5 - ERROR: Failed to run healthcheck for "lspupdate" plugin. Exception: 4 function health#check, line 20 3 Vim(eval):E5108: Error executing lua ...k/packer/start/nvim-lspupdate/lua/lspupdate/packages.lua:21: bad argument #1 to 'pairs' (table expected,...

![image](https://user-images.githubusercontent.com/5415510/109026543-d311e900-76fa-11eb-85f2-07a09627ca41.png) ```bash $ nvim --version NVIM v0.5.0-dev+1109-g6b7cc45c4 Build type: RelWithDebInfo LuaJIT 2.1.0-beta3 ``` nvim config files: https://github.com/yech1990/myneovim.lua

invalid: missing template

Code to reproduce the bug with error log: ```R > library("tidyverse") > library("RNeXML") Loading required package: ape > library("treeio") Attaching package: ‘treeio’ The following object is masked from ‘package:ape’: drop.tip...

When there is an annotation line in front of function, white will add an extra blank line before the function, which will raise error in flake8 syntax check. ![image](https://user-images.githubusercontent.com/5415510/37479834-932f25fc-28b8-11e8-8046-35623be4fdbd.png) ![image](https://user-images.githubusercontent.com/5415510/37479698-380aa1ce-28b8-11e8-8705-7a2912599b37.png)

``` /-1.0, A /1.0, D1.0, C /1.0, F \-1.0, B | | /1.0, H \-1.0, E | | -0.0, root \-1.0, G | | /-1.0, I \1.0, K \-1.0, J...

enhancement
needs info

eg. for python formatting with `neoformat_enabled_python=['black', 'yapf', 'isort', 'docformatter']` setting. - `black` and `yapf` format the whole file, the styles of this two are conflict, thus you just need to...