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Running NextPolish on transcriptome?

1

Does NextPolish work on transcriptome assembly? If so, is there anything I should do differently with regards to running NextPolish? Thanks!

Resume after skipQuant?

3

Hi, I have executed salmon with "--skipQuant". Is there a way to run just the quantification step without re-running the first phase of the algorithm? Thanks!

Kernel runs in background when frontend is killed

1

Hi, I noticed that when I directly close the frontend program that called "jupyter-console" (e.g. my terminal), it leaves the "python -m ipykernel_launcher -f ~/.local/share/jupyter/runtime/kernel-PID.json" running in the background. I...

"Add Server" button is missing

3

Running on a fresh installation of jupyter notebook on "Ubuntu 20.04.2 LTS". When setting up a new server, the buttons for "Add Server" and "Cancel" are missing. Any suggestions on...