xiw588
xiw588
**Describe the issue** Hi I am trying to read in a dataset annotated by ANNOVAR, and the total number or rows should be 14841, however, it turned out to be...
**Describe the issue** Hi, I want to apply maftools to CNV data based on CNS files generated by CNVkit. Each sample has each file. Do you know if this can...
Hi, I want to convert my combined vcf file containing multiple samples to maf file. Can vcf2maf directly handle this? Thank you.
Data access to Landscape of somatic alterations in large-scale solid tumors from an Asian population
Hi, The data from Landscape of somatic alterations in large-scale solid tumors from an Asian population was able to be accessed before, but it is no more on cbioportal now....
Hi, I want to ask if anyone having the same issue with me that it takes extremely long (eg 1h) to plot the figures of qqplot and Manhattan plot. Is...
I am trying to install the package in r but kept receiving the following error messages and was unable to install. trying URL 'https://mirrors.nics.utk.edu/cran/src/contrib/RPostgreSQL_0.7-3.tar.gz' Content type 'application/x-gzip' length 580771 bytes...
Hi, I want to apply your package to my somatic mutation data, but I am not quite sure whether my input data is sufficient. The somatic mutation data I have...
Hi, I just downloaded the manuscript for HLA class II immunogenic mutation burden predicts response to immune checkpoint blockade, and trying to get more details regarding the methods. Can you...
> Please provide example datasets and the code you use. It will help me to understand your problem and help you! I am trying to plot a stacked barplot (proportions...
**Describe the issue** A clear and concise description of what the issue is. There is extra space **Command** Please post your commands and the output (errors or any unexpected output)...